Regulatory Elements: GRIN2C

Gene: glutamate ionotropic receptor NMDA type subunit 2C

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
GRIN2CGH17J074394-17:74394226:G:A0.8850Enhancer284EliteeRNA_co-expressionchr17:74394217-74396117ENSR17_934J9D
FOXA1MITFBHLHE40USF1CTCFPKNOX1JUNDZNF217ZNF316POLR2AZNF687DPF2MAFKESRRAMAFFELF1NFE2L2GATA3ESR1ZFXC11orf30FOSNFE2SMARCE1FOXA1ESR1
GRIN2CGH17J074457--0.0000Enhancer335EliteeRNA_co-expressionchr17:74457641-74457811ENSR17_C9DH5, ENSR17_5MHT4Q
RESTSIX5CTCFKDM1AETV4RELBEP300IKZF1NBNGATA1SMC3SRFTCF12RAD21L3MBTL2RNF2ESRRAFOXA2ZNF579GATA3POLR2AMEF2BCTBP1MTA3SKILSMARCC2FOXA1YY1FOSL2SKIFIP1L1TEAD4NCOA1XRCC5CBX1CC2D1AHNF4GBCORTRIM22SMARCA5ZNF143E2F8RUNX3HCFC1ZNF24ELF1JUNDMAXTBL1XR1SMARCA4BMI1ZNF592ARID2
GRIN2CGH17J074635-17:74637295:G:T1.9278Enhancer278EliteC-HiCchr17:74635050-74638299ENSR17_934LSX
DPF2EEDIKZF1GATAD2BEBF1RAD51IKZF2RELBNFATC3MAXMTA2TBX21ARNTMLLT1PKNOX1NBNBHLHE40TRIM22ZNF687MEF2BZNF592ZBTB40ZNF687SPI1IKZF2IKZF1FOXA1ZNF687SPI1
GRIN2CGH17J074639-17:74639157:A:G0.8946Enhancer372EliteC-HiCchr17:74639068-74640782ENSR17_BJRXK
BHLHE40EEDDPF2EP300MEF2BPKNOX1RELBMTA2IRF5BHLHE40CBFBIKZF1CEBPBSTAT3ETV6RUNX3SPI1POU2F2ARID3AIKZF2POLR2ABHLHE40
GRIN2CGH17J074640-17:74643302:C:A0.7157Enhancer296EliteC-HiCchr17:74640927-74643357ENSR17_76DHMW
BHLHE40RELBMEF2BATF7TBX21EBF1IKZF1SPI1SMAD1ARID3AMTA2IKZF2C11orf30MAFFMAFKZNF316
GRIN2CGH17J074677-17:74677647:C:A0.0664Enhancer185EliteeRNA_co-expressionchr17:74677585-74678400ENSR17_934MB6
SMARCA4SIN3AFOXA1
GRIN2CGH17J074688-17:74689631:T:C0.7147Enhancer312EliteC-HiCchr17:74688281-74691400ENSR17_934MFC, ENSR17_934MFT
IKZF1MTA3NFICEP300CEBPBCREMSKILARNTSPI1BHLHE40RESTIRF4PAX5BCL11ATCF12ASH2LRUNX3IKZF2ARID3ARELBRAD51EEDNBNNFATC3MTA2DPF2ATF7GATAD2BZNF217BMI1TBX21MLLT1TCF12MEF2BPKNOX1MAFKYY1EP300POLR2ARESTBATFSPI1
GRIN2CGH17J074732-17:74732833:C:G0.4462Enhancer235EliteeRNA_co-expressionchr17:74732601-74733672ENSR17_847BRL
HNRNPLZNF444HDAC2FOXA1HDAC1SRFSUZ12CDC5LE4F1CREB1FOXA2LCORLCREB1NBNSRFATMFOXP1RUNX3MEF2BBHLHE40SRF
GRIN2CGH17J074778-17:74778538:C:G0.5204Enhancer394EliteC-HiCchr17:74778046-74781560ENSR17_934NDH, ENSR17_C9FCG, ENSR17_5MKWJM
PKNOX1CEBPBMEIS2HMBOX1GATA3CREB1FOSDPF2ZNF687NR2F1E2F1ATF3ATF7TBPATF4SMARCC2IKZF1GATA2HDAC1ZNF318DPF2SMAD1MEIS2CEBPBTAL1TCF12FOSJUNARID1BJUNDGATA3BHLHE40SMARCE1SMARCA4MAXCTCFIKZF2NFICSRFTBX21BHLHE40ARID3AIKZF1ATF2EEDMTA3TBL1XR1CBFBIRF4BATFEP300RCOR1JUNBSP1MAXPKNOX1PAX5RXRAGABPARUNX3ETS1POLR2AETV6SPI1NR2F2CTCFSIN3AZNF217ZNF444XRCC5RAD21YY1JUNDPKNOX1TBPARID3ARCOR1FOXA1MEIS2KLF16ZKSCAN1TRIM22BHLHE40SMC3ZNF143FOXA2REST
GRIN2CGH17J074782-17:74782498:G:A0.0286Enhancer36-C-HiCchr17:74782272-74782871-
FOXA2FOXA1
GRIN2CGH17J074783--0.0000Enhancer1-C-HiCchr17:74783501-74783651-
CTCFZNF143
GRIN2CGH17J074784-17:74784691:T:C0.4255Enhancer11-C-HiCchr17:74784478-74784842--
GRIN2CGH17J074785-17:74786342:AGGAGCACCT:A0.9292Enhancer223EliteC-HiCchr17:74785379-74787286ENSR17_847CXB
CTCFGATA2TRIM22SMC3RAD21GATA3CEBPB
GRIN2CGH17J074790-17:74791545:T:C0.5009Enhancer292EliteC-HiCchr17:74790800-74791926ENSR17_C9FD8, ENSR17_5MKZC9, ENSR17_5MKZCN
SPI1CTCFIKZF2EZH2CREB3L1POLR2AIKZF1RBM39NR2F2CTBP1MNTEGR1SIN3ANR2F6NR2F1SP1ZNF263NRF1L3MBTL2ATF7SKILHDAC1TBX3RAD21TBX21DPF2HNRNPLLMXI1ARNTMYCMEIS2SMC3XRCC5GATA3CC2D1ASKIYY1TRIM22ZNF579ZNF444SMARCA5MYNNNCOA1RUNX3ZNF592MLLT1ELF1BHLHE40RESTIRF1MAXCREMTBPKLF16KLF5ARID2BACH1POU2F2FOSL2ZNF143SUZ12PAX5JUNDMAFKGATA1PKNOX1ZBTB33RXRASRFRB1TCF12
GRIN2CGH17J074797-17:74798235:A:G0.8693Enhancer56-eQTLs,C-HiCchr17:74797618-74799232ENSR17_934NL3
RCOR1NR2F2SP1JUNDFOSFOSL2GATA2
GRIN2CGH17J074807--0.0000Enhancer138EliteC-HiC,eRNA_co-expressionchr17:74807988-74808242ENSR17_847DDP
MXI1RCOR1
GRIN2CGH17J074812-17:74812508:C:T0.8409Enhancer194EliteeQTLschr17:74812000-74812847ENSR17_BJSTL
USF1EP300SPI1
GRIN2CGH17J074813-17:74813340:G:T0.1794Enhancer181EliteC-HiC,eRNA_co-expressionchr17:74813000-74813413ENSR17_BJSTL
POLR2AEP300CTCF
GRIN2CGH17J074814-17:74813931:G:A0.1417Enhancer36-eQTLs,C-HiCchr17:74813544-74814458-
POLR2AMAFKMAFFCTCFHNRNPL
GRIN2CGH17J074833--0.0000Enhancer173EliteC-HiCchr17:74833981-74834131ENSR17_BJSZN
IKZF1ZNF263PAX5SPI1
GRIN2CGH17J074834-17:74834259:T:C1.0915Enhancer237EliteeQTLs,C-HiCchr17:74834161-74834332ENSR17_BJSZN
IKZF1ZNF263PAX5SPI1EBF1
GRIN2CGH17J074840-17:74843874:C:CT0.6681Enhancer304EliteeQTLs,Distancechr17:74840545-74843945ENSR17_5ML9RT
TAF1L3MBTL2EP300E2F6MITFBHLHE40MAXUSF1SPI1TAF15CTCFRFX5ZFXNRF1ZBTB7ACTCFTAF15SIN3ARBFOX2HNRNPLPOLR2ARBBP5NR3C1POLR2GIKZF1RESTHNRNPLLAGO2ZNF263PAX5XRCC5MXI1JUNDRNF2PHF8SKIE2F6KDM4AYY1HNRNPKZNF143RAD21SMC3RB1SUZ12
GRIN2CGH17J074851-17:74853040:T:C0.6349Enhancer244EliteeQTLs,Distancechr17:74851819-74853375-
RNF2ZFXHNRNPLCTCFNR3C1CREB3L1FUSL3MBTL2NRF1KDM4AMAXAGO1MEIS2E2F6SIN3ARB1RESTMYCHDAC1SMARCA5SAP30ELF1HDAC2BACH1MNTCBX3ETS1USF2BHLHE40MGARBFOX2SP1GMEB1NR3C1ZNF143TCF12USF1JUNDASH2LHNRNPLLCREMKDM1ARBM39POLR2GTBPPOLR2AZNF184EZH2TAF7ZBTB33CTCF
GRIN2CGH17J074859--0.0000Promoter184-Distancechr17:74859901-74859961ENSR17_934P8W, ENSR17_5MLF3R, GRIN2C_1
EZH2CTCFSMC3EP300FOXM1BACH1SAFBAGO1ZBTB7APCBP1RAD21
GRIN2CGH17J074860--0.0000Promoter184-Distancechr17:74860873-74860933ENSR17_934P94, GRIN2C_2
EZH2SUZ12KDM4APOLR2GRBFOX2HNRNPLLIKZF1MEF2BRNF2HDAC6POLR2AHNRNPLPCBP1HNRNPKAGO1ZBTB33HDAC2AGO2
GRIN2CGH17J074861--0.0000Promoter129-Distancechr17:74861479-74861539GRIN2C_3
EZH2SUZ12POLR2GRBFOX2RNF2AGO2
GRIN2CGH17J074862--0.0000Enhancer160-Distancechr17:74862297-74862298-
EZH2RBFOX2SUZ12CTCFAGO1U2AF1TAF15RBM22POLR2APOLR2GAGO2ZNF444NR2F6TRIM22NR2C1GABPAZBTB7ARESTYY1ZNF143NR2F1SMC3RAD21XRCC5NR2F2
GRIN2CGH17J074863-17:74862370:GC:G0.5760Enhancer166-eQTLs,Distancechr17:74862317-74862488ENSR17_5MLFH9
EZH2RBFOX2SUZ12CTCFAGO1U2AF1TAF15RBM22POLR2APOLR2GAGO2ZNF444NR2F6TRIM22NR2C1GABPAZBTB7ARESTYY1ZNF143NR2F1SMC3RAD21XRCC5NR2F2ZEB1
GRIN2CGH17J074864-17:74865023:A:G1.3275Enhancer317EliteDistancechr17:74864799-74865148-
RBFOX2CTCFSKILTHAP1EP300ZNF263DPF2SMC3RAD21SOX6MYCZNF579YY1CTBP1ATF7L3MBTL2ZNF444MNTNEUROD1CBX3XRCC5TRIM22NBNMXI1ZNF143NR2F1UBTFRB1MAFKRCOR1ZKSCAN1ZHX1RESTCEBPBMAFFJUNDTEAD4MAXRFX1NR3C1
GRIN2CGH17J074866-17:74865305:T:C0.8470Enhancer179-Distancechr17:74865218-74865388-
CTCFEP300ZNF263DPF2SMC3RAD21MYCZNF579YY1CTBP1ATF7L3MBTL2ZNF444MNTCBX3XRCC5TRIM22NBNMXI1ZNF143NR2F1UBTFRB1MAFKRCOR1ZKSCAN1JUNDTEAD4MAXRFX1NR3C1MLLT1
GRIN2CGH17J074865-17:74866908:C:T0.9259Enhancer91-eQTLs,Distancechr17:74865490-74867069ENSR17_5MLG53
CTCFMYCMLLT1RBFOX2GABPAPOLR2ARBM39CTCFPOLR2GEBF1TAF15RBM14PCBP1ZNF263RAD21AGO2POLR2AZBTB33
GRIN2CGH17J074869--0.0000Enhancer107EliteDistancechr17:74869416-74869444--
GRIN2CGH17J074870--0.0000Enhancer192EliteDistancechr17:74870636-74870786ENSR17_847FPX
ZNF316POLR2ANFICMAXZNF384
GRIN2CGH17J074871-17:74878123:A:C1.1066Promoter/Enhancer659EliteeQTLschr17:74871526-74878746ENSR17_BJT7C, ENSR17_5MLHDP, ENSR17_847FW2, FDXR_1
ASH2LZBTB2ARHGAP35ARID2POLR2ASIN3AZNF384POLR2AZSCAN29ZBTB40IKZF2GATA2RNF2IKZF1ZNF407NR3C1NBNZEB2DPF2ZNF24HDAC2MTA2MLLT1SMARCC2MAFKZNF639AFF1SMAD1SMARCA5HDAC1NCOA1ZNF444CTCFCDC5LPHF20SUZ12NR2F6ZKSCAN1CTBP1ZNF687GATA3RBFOX2ZBTB7BMXI1RLFIRF5NFRKBNCOA3NR2F1EGR1SKILZNF184E4F1BCORKDM4ABRD9ZBTB7ASMARCA4NCOR1PHF8ZFP91SMC3SAP30PRPF4TCF12RAD21EZH2POLR2GTAF15TRIM22ZNF512BKLF5PKNOX1TFAP4NFICRB1RBM22TBL1XR1MYCPMLHNRNPKZNF263RESTU2AF1BACH1YY1GATA4AGO2UBTFIRF3TAF1KDM5BE2F6HNRNPLLZNF384SMAD5POU2F2RBM39TBPMAXIRF1NRF1SP1NCOR1RFX1ZBTB33GABPACREMELK1E2F1E4F1GATA1ELF1ASH2LHNF4ACREB1STAT3NFICGMEB1ELF4NR2F2FOXK2TCF12MAXRXRAATF3ZBTB40MTA1NFATC3JUNDZHX2HCFC1PRDM10ESRRASREBF2FOXA2NR2C1ARID3AEGR1NCOA1HNF1ARAD51RFX5ZNF384MYCMBD2ZNF512BC11orf30MAFFUSF2MITFFOXA1TBX3ASH1LEP300IRF2ATF4MGASRFMLLT1EP400PHF20KDM5APCBP1E2F8IRF3MNTRCOR1ETS1SREBF1BHLHE40MXI1ATF7TBPTBL1XR1KDM1AHNF4GCLOCKZNF143POLR2GGATA3FOSSIX5ZNF217GABPB1STAT1E2F7NFRKBFOSL2U2AF2L3MBTL2IKZF1IRF1NBNKLF5ZNF639USF1SKILRB1CBFA2T2XRCC5SKINFYBCBX1SMAD5E2F4EEDSIN3BBCL3TAF1PHF8TRIM22NR2F6RNF2CEBPBGATAD2BCBFBZNF207NR3C1HNRNPLLMTA3CTBP1RAD21UBTFETV4RELBTEAD4IKZF2CHD1PAX5IRF4DEAF1GATA4E2F6AFF1NR2F1SAP30AGO2TFAP4ZBED1HDAC6HDAC1HDAC2TAF9BBACH1SOX6TAF7SPI1SMAD1NFE2L2POU2F2SMARCC2CHD4GATAD2APMLCUX1WRNIP1MTA2ARNTRCOR1SMARCA4NFRKBNFATC3TEAD4NFICMYCTBPHMBOX1PYGO2ZNF592ESRRAMTA2PKNOX1MEIS2ELF4SPI1YY1NFYBRNF2ASH1LZNF24FOXK2ZBTB2EHMT2GABPB1KDM1AMAXMNTE4F1TRIP13PHF21AHDAC2SMARCE1ARID1BMAFKLEF1CREMPRDM10AFF1NBNZZZ3ZNF316ZNF639ARID2MLLT1ZNF143PHB2C11orf30NCOA1MGASMARCA5ZBTB40ZFP91KDM1ACBFA2T2NCOR1HDAC2TAL1TCF12TEAD4CBFA2T3ATF3ARID1BPOLR2ASP1JUNDFOSL2MAXZNF592KDM4BRFX1PHF8CTBP1SMARCC2ZNF282ARID2POLR2AMLLT1POLR2GSKILCC2D1AZBTB2HDAC1NFRKBMNTEP400GMEB1SMAD5ZNF24KDM5BDPF2IKZF1ZBTB7AL3MBTL2ZBTB40LEF1GATAD2ARBFOX2RNF2E4F1MTA3SMARCE1TAF9BZEB2NCOA1ARNTNBNHMBOX1ELF4HDAC3TAL1ZSCAN29NR2C1NR2F6SOX6MITFCBFA2T2TBL1XR1NCOR1TRIM28MTA2KDM1ARAD51TCF12EHMT2TRIM24TEAD4E2F6MYCNR2F1ATF3C11orf30IRF1MAXFOXK2FOXM1ARID1BCBFA2T3GATA2HDAC2CREMGATAD2BSMARCA4ZNF316RESTATF4MAFKNR2F2MGABACH1BRD9MAFFEP300NFE2L2NFE2YY1ZNF639PKNOX1MEIS2BCOREGR1PRDM10TCF12CREMSP1ZBTB7ATCF7TBL1XR1FOXA1FOXA2SKINCOR1ZNF384POLR2AZBTB33ARID1BIKZF1UBTFRBFOX2MAXCTBP1RFX1ATF7MYCNFICZEB2KDM1AHDAC2ZMYM3RBM25
GRIN2CGH17J074937-17:74938330:A:G2.5528Enhancer117-eQTLschr17:74937923-74939476-
EHMT2RESTPOLR2APRDM10HNF4ACTBP1ELF1GABPB1ELF4
GRIN2CGH17J074943-17:74944386:T:C2.0456Enhancer91-eQTLschr17:74943173-74945124ENSR17_BJTKL
NRF1POLR2ASP1FOXA1MYCCREB1NR3C1FOSATF2ZBTB33STAT3
GRIN2CGH17J074949-17:74950403:G:A1.8413Enhancer121-C-HiCchr17:74949467-74951379ENSR17_BJTLG
POLR2APOLR2AAGO2FOSPOLR2A
GRIN2CGH17J074952-17:74953051:C:T1.7436Enhancer161EliteC-HiCchr17:74952284-74954191-
POLR2AMNTRBM39MEIS2POLR2ANFRKB
GRIN2CGH17J074981-17:74982017:A:C0.4646Enhancer500EliteeRNA_co-expressionchr17:74981233-74983850ENSR17_BJTR4, ENSR17_847J5L, ENSR17_BJTR7
ZNF316NR3C1SIN3AEZH2HDAC2ATF3SMC3ZBTB40ATF7NR2F6BCL3NR2F1ARNTNBNMNTRCOR1CREMKDM4BJUNDSMARCC2ARID1BZNF318RBFOX2ZEB2AFF1CBFA2T3POLR2AE2F1DPF2ZSCAN29KDM1ANUFIP1DACH1NCOR1ZBTB2CREB1RNF2NR2F2MTA1ESRRATRIM24PHF21AELF1MITFTCF12HCFC1SKILNFRKBZNF444EP400TRIM28CTCFE2F8ATF2RXRARESTNCOA1ZNF24ZNF316JUNLEF1ELF4EGR1TEAD4TBPCTBP1POLR2GYY1SMARCA4SKITAF1NR3C1TBL1XR1TAF9BMLLT1FOXK2SAP30HES1HDAC1ZNF143BCORL3MBTL2MAXRBM39ASH2LPHF8BRD9NRF1SMARCE1RBBP5ZNF217ZNF687PHF20GABPB1PRPF4MAFFPRDM10BHLHE40MYCZNF592CREB3L1SMAD1NR2C1EP300MTA3ETV6PMLZNF263GATAD2BSOX6SP1AGO2ZEB1HNRNPLLZNF639C11orf30CBX3IRF5MBD2ESR1RB1U2AF1RUNX1IKZF1HNRNPKSMAD5ETV4SMC3ETS1ZHX2ZBTB7AHNRNPLRBM34UBTFE2F6FUSXRCC5MGAZFXMEIS2CBX1ELK1IRF1ZHX1GABPAGMEB1AGO1MXI1SIN3BGATA4JUNDTFAP4CUX1TAF15KDM5BSOX13NANOGKDM4ATHAP1PTBP1GATA3GATA2SAP30MITFAFF1NR2F2CHD1NR2C1USF1FOXK2TAF1GABPAFOXA2FOXA1BRD9
GRIN2CGH17J075010-17:75013332:G:A1.2156Promoter/Enhancer737EliteeRNA_co-expressionchr17:75010329-75014074ENSR17_BJTXB, ENSR17_934QTS, ENSR17_BJTXG, ICT1_1
CTCFBMI1RESTRFX1MXI1ATF7E2F1SMARCA4TCF12RAD21CREB1ATF2SIN3AFOXA1BHLHE40POLR2AEP300FOSJUNJUNDATF3FOSL2GATA2GATA3POLR2ARAD21MXI1MAXEZH2RCOR1CHD4SP1EP300POLR2GBHLHE40ETS1USF1FOXA1L3MBTL2GATA3KDM1AUSF2HDAC1IKZF2ZFXCTCFPHF8U2AF2RBFOX2GABPB1MTA2ZZZ3BRD4AGO1ZNF592ZBTB33ARID3AMYBMGAZBTB40MEF2BARID1BHNRNPLMLLT1ASH2LJUNDGABPATAF1ZNF407TCF7L2AGO2CC2D1AFOXA1U2AF1PKNOX1NFICZBTB11FIP1L1PRPF4ZNF579PCBP1SIN3ARAD21NFRKBIKZF1NANOGRB1E2F1MNTHNRNPLLZNF444RCOR1ZNF263TRIM22HNRNPKPTBP1ZHX2SMC3RBM22RFX5SKILC11orf30ATF2ATF3XRCC5GATAD2BEEDZBTB2TRIM28UBTFRBM39BACH1NBNCBX3ZNF207HNRNPUL1ELF1KDM4AGATA2SOX6MXI1E2F8ETV6ELF4ZBTB7AFOSL2ZNF24PMLHSF1KDM5AEP400TBL1XR1MAFFEP300IRF1LEF1CTBP1ZNF282ESRRAGATAD2ATRIM24FOXK2RNF2NCOR1MYCCBX1DPF2NRF1STAT1RESTYY1MBD2EGR1HDAC2GMEB1MAXNCOA1BHLHE40ETV4ELK1SMARCA4PHF20TCF12PHF21AGATA3CBFBFUSIRF4NR3C1ETS1NEUROD1RBBP5ZBTB5ZNF384E2F4SMAD1JUNZKSCAN1FOSATF4MAFKIRF3TBPTFAP4CBX5SIX5RUNX1IRF2BCL3CREB1ZNF687MEF2CARNTSMAD5HCFC1TCF7MEF2AZHX1E2F6JUNBZSCAN29RUNX3ZNF143USF1HNF4GTAF9BRLFRXRAPAX5ZEB2ATF7ZNF217SKIZBED1TBX3PBX3TAF15KDM5BMTA3CEBPBTAF7SPI1SRFNR2C1ZNF574SIN3BCREMSMARCA5NFE2L2KDM4BRELBGATA1FOSL1STAT5ASAP30USF2GATA4CLOCKNFYBHNF1ARXRACREMRAD21USF1GMEB1BRCA1SOX13HNF4GBACH1SMARCA5GATA2ZNF24ZFP91SMAD5KDM1ASIN3ARESTYY1TCF12ARID1BIKZF1TAL1HDAC2CBFA2T3ZNF384SPI1