Regulatory Elements: GRIN2A

Gene: glutamate ionotropic receptor NMDA type subunit 2A

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
GRIN2AGH16J009738-16:9738823:C:T0.5332Enhancer9-eRNA_co-expressionchr16:9738802-9738974-
RBM25
GRIN2AGH16J009744--0.0000Enhancer9-eRNA_co-expressionchr16:9744598-9744612--
GRIN2AGH16J009749-16:9750281:C:A0.1388Enhancer18-eRNA_co-expressionchr16:9749978-9750300--
GRIN2AGH16J009797--0.0000Enhancer91-Distancechr16:9797443-9797593ENSR16_95TZX
CTCFEEDGATA2CREB1FOSJUND
GRIN2AGH16J009807-16:9808133:G:A0.0878Enhancer84-eRNA_co-expression,Distancechr16:9807642-9808426-
PCBP1HNRNPKPCBP2ATF7ATF2CREB1
GRIN2AGH16J009816--0.0000Enhancer56-Distancechr16:9816563-9816713-
MAFKNANOG
GRIN2AGH16J009817--0.0000Enhancer56-Distancechr16:9816763-9816953-
NANOGRAD21
GRIN2AGH16J009818-16:9818786:C:T0.4053Enhancer41-eRNA_co-expression,Distancechr16:9818657-9818802-
CEBPB
GRIN2AGH16J009820-16:9820238:C:T0.4135Enhancer56-Distancechr16:9820185-9822446ENSR16_B3XLT
SMC3NANOGCTCFRESTEP300SIN3AJUNDYY1HDAC2SP1TCF12RAD21ASH2LHDAC2NANOG
GRIN2AGH16J009827-16:9827445:C:G0.5371Enhancer1-Distancechr16:9827443-9827533-
CTCFRAD21
GRIN2AGH16J009840-16:9841209:T:G0.3489Enhancer146-Distancechr16:9840643-9841282-
IKZF1TBPNFYBEP300CBX5MLLT1ATF2ZBED1ZNF217GATAD2BNBNMTA2IKZF2ELF1RUNX3ARNTRESTTBX21ETV6BCL11ATRIM22EEDSRFBATFCREMSPI1BMI1ARID3ADPF2TCF12ATF7RELB
GRIN2AGH16J009843-16:9845907:G:T0.9134Enhancer56-Distancechr16:9843511-9847575ENSR16_95WHJ, ENSR16_95WJ2, ENSR16_89S38
EEDCBFA2T3CBFA2T2GATA2FOSFOSL2GATA2FOS
GRIN2AGH16J009854-16:9854897:A:G0.7546Enhancer1-Distancechr16:9854683-9854993ENSR16_95WLH
STAT3
GRIN2AGH16J009913--0.0000Enhancer1-Distancechr16:9913763-9913913-
EP300
GRIN2AGH16J009914--0.0000Enhancer173-Distancechr16:9914399-9914868ENSR16_89THJ
STAT3CBX5MAXGATAD2BRAD51MTA3NFATC3YY1ZNF687MEF2BEBF1MLLT1NFATC1NFYBSKILARNTIKZF1ZNF217ATF2ETV6RELBMEF2CTRIM22CBFBMTA2IKZF2PKNOX1BCL3TBX21EP300ZNF143BHLHE40JUNBE2F8EEDPAX5ARID3ACREMNFICPBX3TCF12BCL11ASMAD1RUNX3BATFSPI1ATF7MEF2ADPF2ZNF207IRF4NBNZNF384
GRIN2AGH16J009946-16:9946226:A:C0.2186Enhancer56-Distancechr16:9946175-9946410ENSR16_89W73
ZFXTCF12CTCFRAD21SMC3
GRIN2AGH16J009977-16:9978055:A:G1.2749Enhancer96-eRNA_co-expression,Distancechr16:9977867-9978204-
MLLT1RAD51PAX8IKZF1EP300RUNX3RELBJUNBMTA2NBN
GRIN2AGH16J010031-16:10031619:T:C0.6239Enhancer86-C-HiC,Distancechr16:10031523-10031651-
CTCFZNF143SMC3USF1RAD21
GRIN2AGH16J010038-16:10039123:C:G0.9141Enhancer105-Distancechr16:10038875-10040113ENSR16_B3ZRG
USF1FOXA1GATA2POLR2ACTCFASH2LRAD21SMC3EBF1MEF2BZNF143SMARCA4KDM1AEGR1KDM4APCBP1PCBP2CCAR2ZBTB40NCOA4FOXK2ZNF687CTCF
GRIN2AGH16J010078-16:10078667:C:A0.0735Enhancer71-Distancechr16:10078643-10078833ENSR16_9622B
CTCFSMC3TCF12JUNDRAD21EP300
GRIN2AGH16J010079-16:10079833:T:C1.1213Enhancer253EliteDistancechr16:10079410-10081579ENSR16_B422D, ENSR16_8B243
TCF7L2ATF3FOSJUNDMEIS2MYCGATA2STAT3EP300GATA3FOSL2CTCFEP300
GRIN2AGH16J010085--0.0000Enhancer1-Distancechr16:10085523-10085673-
TCF7L2
GRIN2AGH16J010089-16:10091019:C:T1.3149Enhancer36-eQTLs,Distancechr16:10089557-10092957ENSR16_8B29P
FOSSTAT3PKNOX1RBM25
GRIN2AGH16J010092-16:10093006:T:C2.7499Enhancer140-eQTLs,Distancechr16:10092987-10095773-
SMARCA4RAD51BHLHE40LCORLSTAT3MITFCEBPBSREBF1IKZF1NFYBTRIM22USF2CBFA2T2IKZF2USF1
GRIN2AGH16J010096-16:10097878:A:C1.6393Enhancer1-Distancechr16:10096604-10098027ENSR16_8B2FF-
GRIN2AGH16J010099-16:10099560:A:G2.8379Enhancer71-C-HiC,Distancechr16:10099297-10100152-
RFX1
GRIN2AGH16J010101--0.0000Enhancer6-C-HiC,eRNA_co-expression,Distancechr16:10101116-10101152-
CTCFSPI1
GRIN2AGH16J010102-16:10104770:G:C2.6035Enhancer36-C-HiC,Distancechr16:10102111-10105029ENSR16_8B2JR
ZNF316FOSSPI1
GRIN2AGH16J010106-16:10106844:C:T2.1506Enhancer1-C-HiC,Distancechr16:10106457-10108012--
GRIN2AGH16J010113-16:10114361:G:T2.0023Enhancer56-Distancechr16:10113243-10115940ENSR16_962DN
EP300CBFA2T2TAL1CBFA2T3
GRIN2AGH16J010120-16:10122167:G:A2.8010Enhancer178EliteeQTLs,C-HiC,Distancechr16:10120603-10123308ENSR16_8B2X6, ENSR16_8B2XC, ENSR16_962GP, ENSR16_8B2ZF
HNRNPKZBED1ATF7STAT3FOSJUNDCTCFRAD51BHLHE40MITFUSF1IKZF1TCF7L2ESRRAXRCC5SMC3ZNF143RAD21MAFKMAFFZNF316C11orf30FOXA2FOXA1EP300
GRIN2AGH16J010126-16:10127009:C:T1.3447Enhancer73EliteeQTLs,C-HiC,Distancechr16:10126497-10127481ENSR16_962J8
FOSEP300
GRIN2AGH16J010127-16:10127911:G:GA0.7493Enhancer6-eQTLs,C-HiC,Distancechr16:10127864-10127923--
GRIN2AGH16J010128-16:10128951:C:T1.3825Enhancer56-C-HiC,Distancechr16:10128416-10129069-
DPF2ZKSCAN1
GRIN2AGH16J010129-16:10129598:A:C1.5927Enhancer91-eQTLs,C-HiC,Distancechr16:10129251-10131766-
DPF2PLRG1ARNTATF7JUNDATF2EP300
GRIN2AGH16J010132--0.0000Enhancer9-eRNA_co-expression,Distancechr16:10132336-10132740--
GRIN2AGH16J010141-16:10141494:T:C0.7765Enhancer71-C-HiC,Distancechr16:10141484-10142325-
IKZF1SPI1
GRIN2AGH16J010167-16:10168542:G:A1.1751Enhancer1-Distancechr16:10167996-10168816ENSR16_962Z8
EP300FOS
GRIN2AGH16J010174-16:10173025:C:T0.2048Enhancer111-Distancechr16:10173023-10173173ENSR16_B42HR
ELF1TRIM22IKZF2MEF2BRELBNBNSPI1SKILIKZF1DPF2FOXK2EGR1TBX21CBFA2T3ARNTSTAT3BHLHE40FOSATF7
GRIN2AGH16J010173-16:10173380:C:T1.5384Enhancer99-Distancechr16:10173263-10173413ENSR16_B42HR
IKZF2MEF2BRELBNBNSKILIKZF1DPF2EGR1TBX21CBFA2T3ARNTBACH1
GRIN2AGH16J010180-16:10181027:A:G1.3976Promoter/Enhancer411EliteeQTLs,Distancechr16:10180287-10183956ENSR16_54DMNN, ENSR16_9634Z, ENSR16_96354, ENSR16_54DMSM, ENSR16_96357, ENSR16_B42K7, ENSR16_9635M, GRIN2A_3, GRIN2A_2, GRIN2A_4, GRIN2A_1
MNTIKZF1ZNF444AGO1CTCFKDM1AHNRNPKTRIM22BHLHE40PTBP1ZNF574RAD21RESTZNF143SMC3EGR1HNRNPLLKDM4ATAF15ZNF217BHLHE40HNRNPLGATAD2BNBNKLF5IKZF1RBM39MTA3SPI1RAD21SMC3PCBP1MYCDPF2CTBP1ARID2RELBSTAT1BACH1SIN3AZNF263RB1XRCC5HNRNPKIKZF2RNF2MAXE2F6EEDTRIM22RCOR1SKIEP300RFX1YY1ETS1IRF4RESTZNF143PHF8EBF1JUNDKDM5AEZH2SMARCA5RBBP5ASH2LZNF444RESTZBTB33SMARCA4SUZ12ASH2LRBM14TCF7L2SUZ12HDAC6KDM4ABACH1DPF2RBBP5SIN3AIKZF1EBF1GATAD2BIKZF2BHLHE40HDAC1SMARCA5HDAC6RESTCTCFSMC3GABPA
GRIN2AGH16J010256-16:10256855:C:T1.2993Enhancer296EliteeQTLschr16:10256490-10258453ENSR16_B42XX, ENSR16_54F5Q3
CTCFNBNMEF2BRBM39RELBZNF384IKZF2IKZF1STAT5AKLF5CCAR2HDAC1EBF1TAF15RAD21ZNF444RB1EP300TRIM22ELF1YY1ZNF143MTA2STAT1MEF2ANCOA1HCFC1SP1SUZ12TBL1XR1ARID3AKLF16SMC3PRPF4FOSL2ETV4ZBTB7AESRRAGATAD2BZNF592RESTASH2LXRCC5NCOR1CC2D1ACHD4RUNX3KDM1ASKITBPZBTB33CREMMNTRXRANR2F6EGR1EP300ATF3ZNF687SIN3AHNF4GFOXA2FOXA1ZNF24SOX13HNF1AHDAC2SMARCC2TCF7POLR2ATBX3CEBPBJUNDHNF4APOLR2GTFAP4EZH2ZMYM3NFE2L2CREB1CHD4ZHX2JUNDSKIETV4EP300FOXA2FOXA1ZNF24
GRIN2AGH16J010615-16:10620412:G:C1.1000Enhancer456EliteeQTLschr16:10615733-10620579ENSR16_C33G2, ENSR16_967RD, ENSR16_B44WC, ENSR16_967RS
HDAC1CTBP1MYCJUNDZNF592ZNF384CEBPBEP300XRCC5CTCFMYCSP1ASH2LAGO1RXRACLOCKHNF4AHNRNPLLRBBP5POLR2APOLR2GHNRNPLEHMT2ZHX2ZMYM3HDAC1NR2F6RBM39TAF1FOSL2TAF15RBFOX2RESTRFX1YY1EGR1PTBP1NCOR1GATA3CREMZNF217FOXA1FOXA2TFAP4MAFKJUNDKDM1ANRF1XRCC5SOX13MNTCUX1DPF2PKNOX1ZBTB7BSIN3BCTBP1SKIHDAC2MBD2CTCFARID3AGATAD2BTCF7MAFFZBTB7ARCOR1HSF1RAD21TBL1XR1ZNF384ETV4NFIBMYCGATA2ATF3SMARCE1HNF4AZNF444HNRNPLSMC3SMARCA5ELF1TAF1PCBP2CLOCKRCOR1MYCRFX1STAT3FOSCTCFPKNOX1TFAP4POLR2ASMARCA4CLOCKZHX2PHF8KDM4ANRF1POLR2AHNRNPLMNTNFIBPHF20E2F1ZNF639ZBTB7ANFICGATA1CREB1TAF1EP300MYCCTCFGATA3YY1PKNOX1TBPPOU2F2GATA2EGR1DPF2CREMMEIS2RCOR1IKZF1HDAC1SREBF1HDAC2KDM1ACTCFZMYM3CHD4RCOR1BCORZNF143RBM25