Regulatory Elements: GRIN1

Gene: glutamate ionotropic receptor NMDA type subunit 1

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
GRIN1GH09J136884-9:136886047:G:A1.9343Promoter/Enhancer632EliteC-HiCchr9:136884709-136887839ENSR9_CHKQ2, ENSR9_6L4MN9, ENSR9_942BZB, ENSR9_5377BKP, ENSR9_CHKQ5, ENSR9_5377BRG, TRAF2_1
CTCFZNF384SREBF2KDM1AXRCC5YY1TRIM22CREMATF3BCL3GABPASIX5TAF1RESTHDAC2SIN3AETS1ZBTB33CEBPBNR3C1MAFKTCF12CREB1MYCSP1ELF1POLR2ALCORLJUNDFOSL2TBPTCF7USF2POLR2ARFX5BCORNFRKBMLLT1RBFOX2POLR2ACTCFHDAC2RBM39ZFXPOLR2GZNF217ATF4PHF8NFICSIN3ACREB3L1HNRNPKMGASMC3CHD1GATAD2BL3MBTL2ESRRATAF15RNF2SMARCA5HDAC6RESTGATAD2AMAXSAFBZNF282TAF1MXI1CTBP1AGO2EP300NUFIP1E2F6HNRNPLLIKZF1DPF2HDAC1PMLZNF687SIN3BU2AF1E2F8MTA1MNTKDM4AEP400RB1CBFBSMARCE1ATF7SMAD5ARID3ATCF7L2PKNOX1PHF20MTA3BACH1GATA4ETS1PCBP1MYCTBPC11orf30CLOCKZNF24RFX5NRF1RBM25HNRNPLFUSE4F1SMAD1XRCC5GABPAPHF21ASKILSAP30KDM5BSREBF2YY1CBX1RUNX3ZHX1RCOR1IRF2KLF5EGR1SP1DEAF1GMEB1HSF1HCFC1CREMASH1LGATA1ZHX2MBD2NFYBE2F1ELF1THAP1NFYANFE2L2BRCA1IRF3NEUROD1FOXA1PAX5E2F6SIX5CREB1TCF12FOSPBX3USF2NFIBBHLHE40IRF1GABPB1USF1ZBTB40MLLT1NR3C1RBBP5ETS1ZFXZNF687HSF1RB1SAP30MXI1E2F6E2F8BACH1HDAC1SMARCA5HNRNPLSAFBGABPB1GATAD2BTAF15AGO2ZNF282CHD1AGO1FIP1L1MTA1MAXEP300U2AF1ZBTB7AEGR1ZNF207ZNF143GATAD2ATRIM22MBD2CBX1MLLT1ZBTB7BYY1UBTFIKZF1PHF21AMNTRELBFOSL2NBNEP400RESTSTAT1MYCRAD21SMARCA4SMARCB1SIN3BCREMSPI1PHB2MLLT1ATF4
GRIN1GH09J137051-9:137054790:C:CAG1.2511Promoter/Enhancer443EliteC-HiCchr9:137051911-137056498ENSR9_862RJP, ENSR9_B327DH, ENSR9_942DR7, ENSR9_5378DLT, ENTPD2_1
KDM1AZNF444TBPZNF263EBF1MEF2BEZH2MAXGABPASUZ12FUSHNRNPKHNRNPLLMTA3ELK1KDM4ASUZ12RBFOX2POLR2AIRF1PKNOX1BHLHE40SP1GABPASIN3AZFXRXRANRF1MNTELF1YY1POLR2GJUNDCTBP1ZBTB7AFOSL2GATA4FOSEGR1FOSL1AGO2SMARCE1SUZ12MTA1MBD2KDM5BTAF15HNRNPLRBM39RNF2HNRNPKSKITBPHNF4AYY1EP300HNF4GSP1TFAP4MAXETV4ASH2LRESTEGR1POLR2AYY1PCBP1GABPAHNRNPLLNCOR1EP300CTCFNR3C1JUNDHNF4ARAD21TBPMXI1GATA4HDAC2SP1HNF4GNR2F2XRCC5RXRARBM39RBM22SOX13HCFC1SIN3AFOSL2HNRNPLSTAT3USF1
GRIN1GH09J137139--0.0000Promoter249-Distancechr9:137139171-137139231ENSR9_B327SP, GRIN1_1
EZH2SUZ12SAFBRESTFIP1L1MNTSIN3ANRF1HDAC1U2AF1UBTFHNRNPLLELF1SAP30MYCZNF143ETS1GATAD2BGABPACREMHDAC2BACH1MXI1YY1SIN3BMAXSMARCE1BHLHE40RB1ZBTB7A
GRIN1GH09J137149--0.0000Enhancer260EliteDistancechr9:137149901-137151845ENSR9_CHLG7
GATAD2BIKZF1EBF1ZNF143SIN3AMEF2BYY1EBF1RUNX3E2F8SP1NRF1E2F1IKZF1ATF7NCOA1DPF2TRIM24RB1SRFTCF12PCBP1ZNF384E2F7IRF1ZNF143MNTZNF639RBM39ZBTB7AHNRNPLLTBPIRF1DEAF1CTBP1ZNF384NCOA1ZBTB7BMAFFRELBIRF1NFICIKZF1MEF2BMTA2ZBTB7ABHLHE40IKZF2EP300ATF7BCL3ZNF143EEDHDAC2BCL11ASRFSKILSMARCE1ZNF24KDM1ATBX21NBNZNF384MLLT1POLR2AZNF217BCORKLF5
GRIN1GH09J137156-9:137157457:G:A0.3735Enhancer170-Distancechr9:137156396-137157598-
SUZ12IKZF1RLFPCBP1GATAD2BEZH2KDM4AGMEB1L3MBTL2TAF15ZBTB33HDAC1GATAD2AETS1NRF1POLR2GSAFBMAXE2F6BHLHE40EGR1IRF1SP1PRDM10EGR1BHLHE40L3MBTL2CBX3
GRIN1GH09J137160-9:137160818:A:AC0.5749Enhancer210EliteC-HiC,Distancechr9:137160772-137166026ENSR9_537942J
EZH2CTCFKDM4AZBTB33RBM39SUZ12RNF2CTCFZBTB33SMC3HDAC2ZFXGABPB1RAD21KDM4APOLR2GNRF1PHF8GABPAZNF639L3MBTL2MAXPOLR2AE2F6SP1JUNDZBTB33ZNF263MYC
GRIN1GH09J137166-9:137176186:T:C1.4555Promoter/Enhancer589EliteC-HiC,Distancechr9:137166081-137176207ENSR9_537954N, ENSR9_942G2G, ENSR9_B3282P, ENSR9_537965L, ENSR9_5379678, LRRC26_3, LRRC26_2, LRRC26_1
EZH2ZNF263SUZ12EZH2USF1EGR1SAFBTAF15GATAD2BPOLR2AGABPAZNF639HNRNPKIKZF1NRF1ZBTB7AEGR1ZBTB2ZNF444TFAP4MYCMBD2CTCFCTBP1NR3C1KDM5BL3MBTL2GMEB1MGAPOLR2ASUZ12HDAC2BHLHE40EBF1HDAC6MAXFOXA1KLF5ZNF24IKZF1CTBP1RAD21ZNF263HDAC2SREBF2RBM39ZNF217MYCCHD1ELK1MXI1MTA1ZNF24UBTFSIN3AKDM4ARBFOX2GATAD2BTAF1POLR2AGABPAHNRNPLLTCF12HDAC1SMC3E2F6KDM1ARBM22ZNF143CTCFHDAC6MNTSKINRF1RESTNFYBZBTB33ZFXRFX5RNF2HNRNPLSAFBBHLHE40TBPFUSRB1ZNF687MYCGATAD2BDPF2MTA1NFXL1ZNF592SMARCA5PCBP1MYCELF1KDM4AEGR1FOXA1CLOCKEBF1ZNF263MEF2BBHLHE40EBF1HNRNPLZNF444ZNF217GATA3GATAD2BESRRAZFXDPF2ZNF687CTBP1MYCNCOA3ESR1FOXA1SMARCE1ZNF579CLOCKTRIM22MNTPOLR2GRESTSPI1MXI1FIP1L1AGO1MYCRBFOX2POLR2ABHLHE40CTCFPOLR2GPOLR2ARAD21AGO1AGO2ZBTB33RESTBHLHE40GABPASMC3RAD21SIRT6CTCF
GRIN1GH09J137221-9:137223416:G:A0.9288Promoter/Enhancer666EliteeRNA_co-expressionchr9:137221485-137232704ENSR9_942GKD, ENSR9_5379G6L, ENSR9_942GKK, ENSR9_5379G7F, ENSR9_5379GB9, ENSR9_942GKW, ENSR9_942GL9, ENSR9_942GLF, ENSR9_942GLQ, ENSR9_B328BG, ENSR9_5379H3Q, ENSR9_5379H5D, ENSR9_5379HC9, ENSR9_862XB7, ENSR9_B328BZ
CTCFHNRNPKPHF8GATAD2BHNRNPLGABPATAF15NR2F1NR2C1SP1YY1TFAP4ZFXHDAC2HNF4GHNF4ANR2F6RXRANR2F2ZBTB7ACTCFZBTB7AMEF2BSMARCA5EZH2EBF1RBBP5ZFXIKZF1HNRNPLKDM4ARBFOX2HNRNPLLAGO2MTA3ZBTB33POLR2AZNF687POLR2GHDAC2MGABHLHE40SREBF2AGO1CTCFEZH2PHF8PBX3GATA4TFAP4E2F6YY1NRF1MNTRESTCBFBASH2LRXRAXRCC5HNF4AZHX2MYCU2AF1SIN3AEGR1RAD21CBX3NR2F2MXI1JUNDGABPB1ARID3ASUZ12SP1TEAD4ETS1CREB1IRF1GABPATAF1CREMCTCFZNF639MAXPKNOX1ATF7USF1MBD2EP300E4F1SIX5ZBTB40ZNF143EP400RUNX3BHLHE40STAT3BACH1RBM39RFX5FOXK2CUX1ELF4HCFC1IKZF1E2F8ZNF217SRFJUNTBPNEUROD1NFYBZBTB33USF2ELF1MEIS2RELBZBTB2DEAF1ZFXPMLELK1FOSL2MAFKGATAD2BKDM5BZNF263ETV4MAFFCTBP1ESRRAC11orf30HNRNPLLSTAT1PBX3HDAC1SPI1TBL1XR1TRIM28KDM5ASMAD5RB1NCOA1KLF5ZBTB11POU2F2PHF8CREB3L1SIN3BTHAP1ZNF207FIP1L1ZNF687MTA3PHF20TAF15MTA1ZNF444TRIM22SAFBTRIM24BCORSMC3SREBF2SMARCE1CLOCKTAF7GATA3GATA2GATA1ZSCAN29SREBF1POLR2AFOSESRRATBPHNRNPLMYCGABPAMAFKCLOCKSREBF2AGO2RBFOX2AGO1HNRNPLPOLR2GPOLR2AZNF687POLR2GIKZF1FOSJUNDAGO1CLOCKTAF15ZFXRFX1ZNF579STAT3GATA3GABPAAGO2ELF1SMARCA5NRF1POLR2GZNF574SREBF2SREBF1CREB1MNTMTA1ESR1CTCFRBM39MTA3MYCSIN3AESRRANEUROD1NR3C1NCOA3RCOR1NFIBCTBP1ZNF217GATAD2BSETDB1JUNDEP300ZNF282DPF2ATF7MBD2ZBTB7BSMARCE1TBPMEF2BIKZF2ZNF579BRD9ZNF263IKZF1SMC3RESTRAD21STAT1TAF1RFX5RB1XRCC5ZBTB7AGMEB1TBL1XR1GABPAMAXBACH1RBM22BHLHE40ELF1MYCMNTRUNX3MXI1ZNF24SMARCA5POU2F2HNRNPLSKIELK1MYNNARID2HCFC1CC2D1AUBTFSMARCA4PCBP2KLF16RNF2HNF4AYY1ZNF592RCOR1EP300PKNOX1ZEB2ZNF143CREMNFICMEF2ANFE2L2CHD1HDAC2IRF4MLLT1ZNF512BTRIM22GATA3FOSL2ZNF444FOXA1PRDM10KDM1AEGR1CBX3PCBP1HNRNPKAFF1BHLHE40AGO1AGO2FIP1L1POLR2GHNRNPLJUNDKDM5BTAF15RBFOX2YY1EGR1HDAC2CREMZBTB33MYCPOLR2AETV4XRCC5EGR1RBM22YY1PKNOX1SOX13MAFFHNRNPLLHNF4GMAFKHNF4ARBFOX2ZNF316POLR2APRDM10AGO2C11orf30PCBP1ZBTB33U2AF1SIN3ACREMTFAP4NR2F6SP1HNRNPLRXRAJUNDFOSL2HNF4GHNF1ARBM39HDAC2HNRNPH1FOXA1ZBTB7AFOXA2TFAP4USF1BHLHE40POLR2ANR2C1RBFOX2HNRNPLPOLR2GZFXMGAMYCE2F6POLR2APOLR2GMAX
GRIN1GH09J137233-9:137235809:T:C0.8933Promoter/Enhancer761EliteeRNA_co-expressionchr9:137233372-137243238ENSR9_5379JKD, ENSR9_5379JMQ, ENSR9_5379JNG, ENSR9_5379JPB, ENSR9_942GQX, TUBB4B_1
POLR2GZBTB33CTCFAGO1HNRNPLAGO2FIP1L1MYCPOLR2ANFE2EGR1ZBTB7AHNRNPKPOLR2GL3MBTL2PCBP1NRF1AGO1RBFOX2MYCZBTB33MAXEGR1E2F6AGO2HNRNPLCTCFRBM22GATAD2BIKZF1MEF2BCTCFEBF1SPI1TBX21ZBTB7ARBFOX2RBM39KDM5AKDM5BETV4TAF15ZMYM3HNF1ARAD21POLR2GSKIZBTB7AHNRNPLLSMARCA5U2AF1SIN3ABHLHE40MNTRAD21YY1ZBTB7ASP1HNF4AZBTB33HDAC2HNF4GETS1AGO1RBFOX2SIN3BAGO2POLR2ATAF15HDAC1GATA1NCOR1NRF1CREB3L1SIN3ASMAD5PKNOX1HDAC2HNRNPLGABPB1SMARCC2ASH2LZNF207HNRNPKSKILDPF2SMARCA4CCAR2NBNSMARCE1ZNF282MNTMTA3LEF1ZEB2NR2F1NR2F6BCORAFF1TRIM24CREMHNF1AE2F7SOX13CBFA2T3ATF7FOXA2MITFHNRNPLLGATA4JUNDNCOA1SP1HES1ESRRAPRDM10PHB2FOXM1KDM4BPCBP1MEIS2USF2DACH1ZNF579FOSL2FOXK2TFAP4ZNF639RNF2NR2F2USF1CC2D1AE2F8ZBTB7AZBTB2MXI1RESTFIP1L1ZNF217FOXA1BHLHE40TCF12CBFA2T2PHF21AGATA2RBM22RAD51SIX5EP300GABPATBL1XR1MAXTEAD4IRF2RBM39TAL1ETV4ZHX2CTBP1ZBTB33HNF4GMYNNCBX3ZNF24POLR2ARXRAELF1SKIRAD21MYCSMAD1RLFTAF7ARID2IKZF1THAP1NEUROD1STAT5ASMC3MTA2GATAD2AHCFC1L3MBTL2SOX6STAT1ZKSCAN1ETV6XRCC5ZHX1MLLT1ZNF143RB1CBX5TRIM22NR3C1BACH1ARNTZBTB7BZNF592YY1EGR1ATF3SMARCA5KLF16ZMIZ1MTA1IRF3ZNF444EBF1MEF2BSAFBRELBRXRAPBX3IKZF2SMAD2EEDRUNX3GATAD2BTCF12BHLHE40ZBTB7ACTCFMEF2BPOLR2AXRCC5POLR2GBMI1MNTRFX1ZBTB33TFAP4BHLHE40SMARCA4FOXA1HNRNPLZNF263AGO2PMLRBFOX2MYCIKZF1BCORARNTZBTB33MLLT1ARHGAP35HDAC1NFICEZH2KDM5BRBFOX2HDAC2NRF1NFRKBSIN3ARBM39MTA3POLR2GRFX1POLR2APHF8MXI1ZFXASH2LYY1TAF1L3MBTL2HNRNPLLRBBP5HNF4GBRD4HNRNPLHDAC6JUNBHLHE40CTCFJUNDMEF2BDPF2FIP1L1TCF12MNTMAXZBTB7BCBX3SAFBNBNIKZF1TBL1XR1TEAD4RNF2SREBF1HNRNPKMLLT1EGR1MTA1ZNF217ZNF24GATAD2ABRD9ZNF687HES1PMLNR2F2CLOCKCREMMYCHCFC1RESTRAD51CREB3L1PHF20CTBP1USF2E2F6NFE2L2IKZF2GATAD2BCBFA2T3ETS1SAP30CBX1NR2F1MITFBACH1TRIM24EEDZBTB7AZNF282ZBTB2STAT3PRDM10FOXK2MTA2EP300BCORZEB2USF1SOX6TRIM22AGO2SMARCA5CHD1U2AF2KDM4BATF7ESRRAZNF207TAF15KDM4AZNF512BE2F8SMAD1RB1FUSSMARCA4ZNF639STAT1RUNX3IRF1ARID3AZBED1ELF1NFIBYY1ZNF143MAFKUBTFGABPB1PCBP1NR3C1GABPARFX1THAP1ELK1TCF7L2MEIS2GATA1RUNX1MNTNFYBZHX1FOXA1JUNZBTB40RBM25PKNOX1SP1RFX5FOXM1ASH1LIRF3USF2ZNF184CUX1MBD2CREB1ZBTB5NEUROD1GATA2TBX3E2F4ZNF217GATA3ESRRAMTA3DEAF1E4F1ARID3ACREMIRF1PBX3SKILFOSSRFNFATC3EP300U2AF1NFYATBX21SREBF2TBPNFIBCC2D1ATCF12EGR1NBNZNF444CLOCKZBTB33RESTFOXK2NFRKBCHD1TEAD4RNF2TCF7ETS1HCFC1HNRNPLZBED1TBL1XR1BHLHE40HDAC1KDM5BKLF5ZBTB11SMAD5NFE2L2MYNNMTA1PRPF4TAF1NCOA1BCL3PTBP1HDAC6RBM39ZNF579POU2F2LEF1PHF8MYBRCOR1TAF7PMLRBM14RUNX1YY1RAD21STAT1ZNF143SOX13ELF4JUNDZNF207CBFBMEF2ASMC3SKIZNF687GATA4RBM22UBTFRUNX3SMARCA5BACH1MEF2CCBX1NCOR1ZNF24SMAD1STAT5ANFXL1ZKSCAN1FIP1L1ZSCAN29ZHX2ARNTE2F1CREB1HDAC2RXRARB1ZBTB7AZFXASH2LFUSAGO2JUNJUNDFOSL2NFE2FOSFOSL1NRF1RESTHNRNPKGATAD2AZFP91MLLT1RBM22NR3C1HDAC1POLR2AU2AF1PHF20TAF15NCOR1XRCC5PRPF4ESRRASAFBSIN3AZBED1SREBF2HNF4ANR2F6KDM5BHNF4GHNRNPLRBM14AGO1HNRNPLLSKIZBTB7ASNRNP70SAP30MNTAGO1BACH1RB1PRPF4KDM5BZBTB33FIP1L1RBM22ZHX2SMAD5
GRIN1GH09J137380--0.0000Enhancer13-eRNA_co-expressionchr9:137380282-137380628--
GRIN1GH09J137516--0.0000Enhancer166-eRNA_co-expressionchr9:137516954-137517355-
MTA2ZNF592MTA1ZNF207ZNF512BGATAD2BZKSCAN1GATAD2AMTA3HDAC2ZNF444HDAC1ZBTB2NCOA1
GRIN1GH09J137518--0.0000Enhancer173-eRNA_co-expressionchr9:137518542-137518961-
CTBP1MTA2ZNF444ZNF24GATAD2BZBTB2TRIM24HDAC2GMEB1DPF2ZNF687ASH2LHDAC1ARHGAP35ARID1B
GRIN1GH09J137592-9:137594008:C:T2.3704Enhancer327EliteeRNA_co-expressionchr9:137592299-137594296-
ZNF384CTCFESRRAMTA1FOXA2POLR2AMYCFOXA1CTCFSPI1MNT