Regulatory Elements: GRIK2

Gene: glutamate ionotropic receptor kainate type subunit 2

GeneGHIDGWAS HitLead SNP-log10PTypeScoreEliteAssociation EvidenceLocationExternal LinksTFBSs
GRIK2GH06J100662-6:100663108:C:T1.7403Enhancer105-eQTLschr6:100662809-100664346ENSR6_93GXR5
FOXA2FOSJUNDCEBPBNFE2L2ZNF316MAFKMAFFCTCFTRIM22IRF1KLF16ARID3ARAD21SMC3ZNF143
GRIK2GH06J100877-6:100878918:C:A2.6534Promoter/Enhancer573EliteeQTLs,Distancechr6:100877756-100882297ENSR6_84Z47C, ENSR6_BQ2K2, ENSR6_84Z48F, ENSR6_BQ2K7, ASCC3_1, GRIK2_3
CHD1CHD7POLR2AYY1NANOGSRFMLLT1BACH1CTCFTAF1EP300ZNF24PKNOX1ATF3SP1SMC3FOXA2FOXA1HDAC1ZNF143CEBPBRESTASH2LNR2F2SIN3ATAF1RBFOX2WRNIP1POLR2AETS1NR3C1POLR2GCLOCKNR2F1NFICEP300RLFMYCAGO1PHF8RUNX3MLLT1TAF15ATF2IKZF2GATAD2AZNF24BHLHE40ZSCAN29AGO2TRIM28TBX3RAD21NCOA1IRF1RBM39PCBP1EZH2MTA3KDM4AMAXZBED1GMEB1RNF2IRF2ZNF263YY1MNTZNF217PRPF4SREBF2SAP30DPF2NRF1ESRRAFIP1L1EP400RBM22GATAD2BPKNOX1ZBTB7ATAF9BARID3AKDM5ACBFBSKILL3MBTL2ZFXSMARCA5ATF7SMAD5RBBP5MXI1RELBZNF282SIN3BKDM4BNBNSP1ZNF687TAF1HDAC2SKIIKZF1HCFC1FOXK2TAF7CREB1NCOR1NFIBRB1STAT1PHF20PRDM10MEIS2CTBP1SMAD1E2F1RFX5MTA1SOX6MBD2KDM5BRUNX1TBPCREB3L1NCOA6FUSNEUROD1SETDB1CREMZHX2JUNDC11orf30RCOR1ATF3ZBTB2TRIM22ZNF639EGR1ZNF207HNRNPLLCTCFZEB1CBX1NR3C1SMARCA4MGAJUNUBTFEEDNFRKBHDAC6KLF5USF1TBL1XR1RAD21SMC3E2F6ZNF143GATA4ZFP91GATA3ELF1FOXA1NFATC3BACH1SRFTEAD4ZBTB40TCF7L2GABPB1FOXA2RLFSMARCC2JUNE2F6TAL1FOXM1
GRIK2GH06J101011-6:101011358:G:A0.3492Enhancer56--chr6:101011200-101011400ENSR6_93H4HS
HNF4ATCF12IRF1NFYBSPI1
GRIK2GH06J101080--0.0000Enhancer143--chr6:101080684-101080854ENSR6_BQ3LX
POLR2ASP1GABPAMAFKRESTATF3BCL3CEBPBNR3C1FOSSTAT3FOSL2MAFFGATA3CUX1PKNOX1TCF12
GRIK2GH06J101083-6:101083736:C:T0.7171Enhancer170-eQTLschr6:101083022-101084324ENSR6_BQ3MD
ATF3GABPAETS1ZBTB33BCL3JUNDTCF7L2YY1SP1TCF12RESTFOXA2FOSFOSL2STAT3FOXA1SMARCE1POLR2AZNF24NANOGCEBPB
GRIK2GH06J101117-6:101117687:G:A0.3811Enhancer99--chr6:101117600-101117800ENSR6_93H5MJ
CTCFMYCSMARCA4RAD21ZEB1SREBF1USF2USF1
GRIK2GH06J101206-6:101208122:A:G1.0721Enhancer71-Distancechr6:101206257-101208906-
EP300RXRAHNF4APKNOX1EP300POLR2A
GRIK2GH06J101227--0.0000Enhancer133-Distancechr6:101226664-101226834ENSR6_BQ4F4, ENSR6_5TRT4Z
ZBTB7BPKNOX1CTCFZNF579DPF2RCOR1GATA3ZNF24CTBP1ESRRAJUNDUSF1FOS
GRIK2GH06J101226-6:101227028:T:TG0.3215Enhancer143-Distancechr6:101226924-101227134ENSR6_BQ4F4, ENSR6_5TRT6C, ENSR6_5TRT6S
ZBTB7BPKNOX1CTCFZNF579DPF2RCOR1GATA3ZNF24CTBP1ESRRAJUNDUSF1FOSRAD21TRIM22ZNF217ZNF143ATF3ELF1SMC3
GRIK2GH06J101295-6:101296296:G:A1.3912Enhancer133-eQTLs,Distancechr6:101295647-101297358ENSR6_BQ4R6
RCOR1FOSMYCSMARCA4MXI1RAD21GATA2TCF7L2
GRIK2GH06J101392-6:101394302:C:A1.3913Promoter/Enhancer372EliteDistancechr6:101392668-101394399ENSR6_BQ5B2, ENSR6_BQ5B7, ENSR6_5TSWPK, ENSR6_5TSWPZ, ENSR6_BQ5B9, GRIK2_1
EZH2SUZ12TAF1KDM4ASMARCA4MXI1KDM4ARFX1CTCFRBBP5EP300TCF7L2ZNF579SMC3KDM4APKNOX1ZFP91HNRNPLLSMARCA5ZNF444RAD21CTBP1TRIM22POLR2ASMARCA4MYCRNF2SUZ12SMARCA4BHLHE40
GRIK2GH06J101398--0.0000Promoter94-Distancechr6:101398761-101398821GRIK2_2
CEBPBSUZ12MXI1SMC3EZH2
GRIK2GH06J101401-6:101401787:C:G0.8711Enhancer167EliteDistancechr6:101401711-101402200ENSR6_BQ5CG
KDM4AMXI1TAF1SIN3AMYCUSF1YY1BHLHE40RBBP5EP300SP1TAF7RAD21HDAC2ASH2LRXRACTCFEZH2ZNF143
GRIK2GH06J101405--0.0000Enhancer71-Distancechr6:101402224-101402318ENSR6_BQ5CG
KDM4AMXI1RBBP5EP300RAD21ASH2LCTCFEZH2ZNF143HDAC2
GRIK2GH06J101402--0.0000Enhancer56-Distancechr6:101402344-101402374ENSR6_BQ5CG
KDM4AMXI1RBBP5EP300RAD21ASH2LEZH2ZNF143HDAC2
GRIK2GH06J101404-6:101402387:T:C0.0097Enhancer56-Distancechr6:101402384-101402494ENSR6_BQ5CG
KDM4AMXI1RBBP5EP300RAD21ASH2LEZH2ZNF143HDAC2PHF8
GRIK2GH06J101406--0.0000Enhancer36-Distancechr6:101402744-101402894ENSR6_93H8P4
KDM4AASH2LEZH2HDAC2PHF8KDM1ARAD21MXI1
GRIK2GH06J101403--0.0000Enhancer36-Distancechr6:101402904-101402954ENSR6_93H8P4
KDM4AASH2LEZH2HDAC2PHF8KDM1AMXI1
GRIK2GH06J101417--0.0000Enhancer44-eRNA_co-expression,Distancechr6:101417995-101418142-
GATA2
GRIK2GH06J101597-6:101597671:T:C1.0535Enhancer82-Distancechr6:101597608-101598295ENSR6_93HBRJ
JUNDBHLHE40RCOR1CREB1NFE2L2FOSCTCFCEBPBATF7ATF2
GRIK2GH06J101614-6:101614696:G:A0.3626Enhancer91-Distancechr6:101614529-101616115ENSR6_93HBZG
CREB1JUNDFOSCHD7JUNEP300NANOGEP300
GRIK2GH06J101666-6:101666905:A:G0.9026Enhancer71-Distancechr6:101666365-101669205ENSR6_93HCJC
ESR1FOSMYCSTAT3FOSSTAT3MYCSMARCA4
GRIK2GH06J101716--0.0000Enhancer91-Distancechr6:101716945-101717155ENSR6_93HD42
CHD7TCF12ETS1NANOGSP1EGR1BCL11AEP300
GRIK2GH06J101722-6:101723247:T:C0.6173Enhancer178EliteDistancechr6:101722283-101724058ENSR6_BQ73W
TCF7L2NFE2L2MAFFMAFKFOSL2JUNDFOSBHLHE40CEBPBSTAT3MAFK
GRIK2GH06J101760-6:101761206:T:A0.4070Enhancer208EliteDistancechr6:101760944-101761764ENSR6_BQ79F
EP300JUNDFOXA1MAXRXRASP1ATF3MAFKHNF4AEGR1RAD21STAT3FOXA2FOSEP300MYCCEBPBYY1ZBTB33HNRNPK
GRIK2GH06J101803-6:101803284:C:T0.3185Enhancer44-Distancechr6:101803260-101803334-
FOSJUNB
GRIK2GH06J101805-6:101805672:G:A0.5063Enhancer71-Distancechr6:101805492-101807484ENSR6_BQ7HX
NFICJUNBRUNX3JUNDGATA2FOS
GRIK2GH06J101847-6:101848373:G:A0.4895Enhancer56-Distancechr6:101847576-101848515-
HDAC2CTCFYY1RAD21USF1
GRIK2GH06J101851-6:101851957:C:CAA0.5069Enhancer11-Distancechr6:101851954-101851968-
SP1
GRIK2GH06J102069-6:102069739:T:C0.0444Enhancer63-Distancechr6:102069606-102069922--